2018, Cilt 48, Sayı 1, Sayfa(lar) 045-051 |
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Comparison of the Results of BD GeneOhm VanR Assay with Those of the Culture for Screening of Vancomycin- Resistant Enterococci |
Reyhan YİŞ |
Bozyaka Eğitim ve Araştırma Hastanesi, Mikrobiyoloji ve Klinik Mikrobiyoloji Kliniği, İzmir |
Keywords: Vancomycin-resistant enterococcus, colonization, Real-Time PCR, surveillance |
Objective: Culture-based vancomycin resistant enterococci
(VRE) identification methods generally require 24-72
hours. Rapid isolation of VRE colonised patients is crucial
to prevent colonisation of other patients and propable
infections. The aim of this study is to compare the results of
BD GeneOhm VanR test which identifies VRE in a short
time with the gold standard which is VRE culture.
Material and Methods: A total of 704 samples in the study
were cultivated on VRE agar. At the same time, all perirectal
swap samples were evaluated with real-time PCR.
Results: Among the evaluated samples, 121 (17.2%) were
positive with VRE agar and 162 (23.0%) were positive with
real-time PCR. The number of samples which were positive
with both diagnostic methods were 118. Of the samples, 44
were found to be positive only with real-time PCR and 3
with culture methods. The number of samples negative with
both methods were 539 (76.6%). All VRE positive samples
except 3 were Enterococcus faecium carrying VanA
phenotype, and the 3 samples mentioned were identified as
E. faecalis carrying VanB phenotype with both culture and
real-time PCR. According to these results; sensitivity,
specificity, positive predictive (PPV) and negative predictive
values (NPV) of BD GeneOhm VanR test compared to VRE
culture were 98, 92, 73, and 99%, respectively.
Conclusion: Culture-based methods and nucleic acid
amplification tests require 24-72 hours for VRE identification.
BD GeneOhm VanR test is a simple diagnostic method that
is directly carried out on the sample and takes less than 3.5
hours to obtain results. On the other hand, it gives repeatable
results in patient samples and in different laboratories, and
it has high PPV and NPV. Its other advantage is the
identification of the VRE-resistance gene.
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